Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna--[protein]-cysteine s-methyltransferase | DXD04_08060 | Not Available | Negative | 1987162 - 1987668 | 18642.4 |
| l-serine ammonia-lyase | DXD04_08065 | Not Available | Negative | 1987865 - 1989073 | 43731.0 |
| endonuclease muts2 | DXD04_08070 | Not Available | Negative | 1989145 - 1991646 | 94845.1 |
| mate family efflux transporter | DXD04_08075 | Not Available | Negative | 1991885 - 1993234 | 50157.0 |
| restriction endonuclease | DXD04_08080 | Not Available | Negative | 1993283 - 1994188 | 33980.7 |
| Trna-leu | Not Available | Not Available | Positive | 1994473 - 1994557 | Not Available |
| peptidase s41 | DXD04_08090 | Not Available | Negative | 1994631 - 1995656 | 38966.8 |
| duf3316 domain-containing protein | DXD04_08095 | Not Available | Negative | 1995658 - 1996506 | 32220.4 |
| dna gyrase/topoisomerase iv subunit a | DXD04_08100 | Not Available | Negative | 1996513 - 1999158 | 100953.0 |
| abc transporter permease | DXD04_08105 | Not Available | Negative | 1999397 - 2000458 | 39879.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

