Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trag family conjugative transposon atpase | DXD04_00755 | Not Available | Positive | 191394 - 193898 | 96456.9 |
| duf3876 domain-containing protein | DXD04_00760 | Not Available | Positive | 193936 - 194319 | 14460.4 |
| duf4141 domain-containing protein | DXD04_00765 | Not Available | Positive | 194350 - 194979 | 24171.3 |
| conjugative transposon protein traj | DXD04_00770 | Not Available | Positive | 194983 - 195987 | 37181.9 |
| conjugative transposon protein trak | DXD04_00775 | Not Available | Positive | 196019 - 196642 | 24030.7 |
| duf3989 domain-containing protein | DXD04_00780 | Not Available | Positive | 196649 - 196957 | 11768.5 |
| conjugative transposon protein tram | DXD04_00785 | Not Available | Positive | 196938 - 198293 | 48966.9 |
| conjugative transposon protein tran | DXD04_00790 | Not Available | Positive | 198363 - 199421 | 39739.7 |
| conjugal transfer protein trao | DXD04_00795 | Not Available | Positive | 199424 - 199999 | 21053.4 |
| dna primase | DXD04_00800 | Not Available | Positive | 200008 - 200907 | 33701.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

