Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | DXD04_08010 | Not Available | Negative | 1978734 - 1979588 | 31505.9 |
| peptidylprolyl isomerase | DXD04_08015 | Not Available | Negative | 1979670 - 1980263 | 21600.3 |
| fimbrillin family protein | DXD04_08020 | Not Available | Positive | 1980562 - 1981497 | 32440.0 |
| sdr family nad(p)-dependent oxidoreductase | DXD04_08025 | Not Available | Positive | 1981678 - 1982472 | 28597.7 |
| arac family transcriptional regulator | DXD04_08030 | Not Available | Negative | 1982442 - 1983347 | 34568.4 |
| cytidylate kinase family protein | DXD04_08035 | Not Available | Positive | 1983473 - 1984771 | 48946.4 |
| class a beta-lactamase, subclass a2 | DXD04_08040 | Not Available | Negative | 1984750 - 1985643 | 33590.0 |
| 50s ribosomal protein l27 | DXD04_08045 | Not Available | Negative | 1985760 - 1986023 | 9148.99 |
| 50s ribosomal protein l21 | DXD04_08050 | Not Available | Negative | 1986045 - 1986362 | 11699.2 |
| had family hydrolase | DXD04_08055 | Not Available | Negative | 1986511 - 1987155 | 24006.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

