Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m64 | DXD04_07960 | Not Available | Positive | 1965752 - 1967038 | 48492.4 |
| gnat family n-acetyltransferase | DXD04_07965 | Not Available | Positive | 1967060 - 1967596 | 20715.6 |
| tolc family protein | DXD04_07970 | Not Available | Negative | 1967662 - 1969044 | 51428.1 |
| multidrug efflux rnd transporter permease subunit | DXD04_07975 | Not Available | Negative | 1969063 - 1972167 | 113042.0 |
| efflux rnd transporter periplasmic adaptor subunit | DXD04_07980 | Not Available | Negative | 1972191 - 1973387 | 44764.1 |
| nitrous oxide-stimulated promoter family protein | DXD04_07985 | Not Available | Negative | 1973567 - 1973872 | 12590.5 |
| threonine/serine exporter family protein | DXD04_07990 | Not Available | Positive | 1973958 - 1975343 | 51364.6 |
| antibiotic biosynthesis monooxygenase | DXD04_07995 | Not Available | Negative | 1975476 - 1975751 | 10308.4 |
| 30s ribosomal protein s1 | DXD04_08000 | Not Available | Negative | 1975851 - 1977635 | 66516.6 |
| simpl domain-containing protein | DXD04_08005 | Not Available | Negative | 1977835 - 1978539 | 26269.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

