Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna degradosome polyphosphate kinase | DXD04_07860 | Not Available | Positive | 1935793 - 1937850 | 80397.3 |
| potassium/proton antiporter | DXD04_07865 | Not Available | Negative | 1937847 - 1939307 | 53495.9 |
| tonb-dependent receptor | DXD04_07870 | Not Available | Positive | 1940024 - 1941997 | 74363.6 |
| hypothetical protein | DXD04_07875 | Not Available | Positive | 1942015 - 1943106 | 39940.2 |
| abc transporter substrate-binding protein | DXD04_07880 | Not Available | Positive | 1943112 - 1944248 | 42490.9 |
| iron abc transporter permease | DXD04_07885 | Not Available | Positive | 1944245 - 1945285 | 36284.8 |
| abc transporter atp-binding protein | DXD04_07890 | Not Available | Positive | 1945285 - 1946298 | 37580.5 |
| hypothetical protein | DXD04_07895 | Not Available | Positive | 1946374 - 1946787 | 15827.9 |
| duf3440 domain-containing protein | DXD04_07900 | Not Available | Positive | 1946774 - 1948072 | 51496.0 |
| chromosome partitioning protein parb | DXD04_07905 | Not Available | Positive | 1948069 - 1948605 | 20340.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

