Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4375 domain-containing protein | DXD04_07810 | Not Available | Positive | 1926329 - 1926838 | 19716.2 |
| hypothetical protein | DXD04_07815 | Not Available | Positive | 1927010 - 1927798 | 29379.2 |
| hypothetical protein | DXD04_07820 | Not Available | Negative | 1927815 - 1928027 | 8438.65 |
| duf1282 domain-containing protein | DXD04_07825 | Not Available | Positive | 1928193 - 1928762 | 21697.8 |
| ssra-binding protein | DXD04_07830 | Not Available | Positive | 1928762 - 1929220 | 18011.0 |
| methionine synthase | DXD04_07835 | Not Available | Positive | 1929244 - 1932006 | 101485.0 |
| uracil-dna glycosylase | DXD04_07840 | Not Available | Positive | 1932025 - 1932687 | 24933.7 |
| aspartate--ammonia ligase | DXD04_07845 | Not Available | Negative | 1932787 - 1933827 | 39707.2 |
| dtdp-glucose 4,6-dehydratase | DXD04_07850 | Not Available | Negative | 1934035 - 1935174 | 43641.8 |
| metallophosphoesterase | DXD04_07855 | Not Available | Negative | 1935238 - 1935729 | 18621.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

