Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3871 family protein | DXD04_07760 | Not Available | Negative | 1915979 - 1916971 | 37392.8 |
| hypothetical protein | DXD04_07765 | Not Available | Positive | 1917157 - 1917339 | 7194.98 |
| hypothetical protein | DXD04_07770 | Not Available | Negative | 1917334 - 1918143 | 31264.6 |
| hypothetical protein | DXD04_07775 | Not Available | Negative | 1918861 - 1920630 | 68498.2 |
| hypothetical protein | DXD04_07780 | Not Available | Negative | 1920627 - 1921058 | 16871.4 |
| hypothetical protein | DXD04_07785 | Not Available | Negative | 1921117 - 1921641 | 20085.2 |
| hypothetical protein | DXD04_07790 | Not Available | Negative | 1921819 - 1922661 | 32522.2 |
| site-specific integrase | DXD04_07795 | Not Available | Negative | 1922743 - 1923960 | 47114.4 |
| gggtgrt protein | DXD04_07800 | Not Available | Negative | 1924305 - 1925315 | 35895.1 |
| hypothetical protein | DXD04_07805 | Not Available | Negative | 1925336 - 1926037 | 25225.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

