Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf308 domain-containing protein | DXD04_07605 | Not Available | Positive | 1890985 - 1891554 | 20511.3 |
| arac family transcriptional regulator | DXD04_07610 | Not Available | Positive | 1891551 - 1892399 | 32942.3 |
| yeih family protein | DXD04_07615 | Not Available | Negative | 1892461 - 1893537 | 38217.0 |
| hypothetical protein | DXD04_07620 | Not Available | Positive | 1893730 - 1894398 | 25052.4 |
| trna pseudouridine(38-40) synthase trua | DXD04_07625 | Not Available | Positive | 1894410 - 1895168 | 29212.7 |
| dna metabolism protein | DXD04_07630 | Not Available | Negative | 1895165 - 1895932 | 30703.8 |
| linear amide c-n hydrolase | DXD04_07635 | Not Available | Positive | 1896066 - 1897133 | 39276.8 |
| putative dna modification/repair radical sam protein | DXD04_07640 | Not Available | Negative | 1897168 - 1898457 | 49197.2 |
| eama family transporter | DXD04_07645 | Not Available | Positive | 1898549 - 1899454 | 34247.1 |
| fad:protein fmn transferase | DXD04_07650 | Not Available | Negative | 1899707 - 1900720 | 37813.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

