Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag | DXD04_00700 | Not Available | Negative | 183823 - 185841 | 77090.4 |
| relaxase | DXD04_00705 | Not Available | Negative | 185872 - 187119 | 46565.8 |
| moba protein | DXD04_00710 | Not Available | Negative | 187098 - 187526 | 16824.5 |
| hypothetical protein | DXD04_00715 | Not Available | Negative | 187796 - 187975 | 6265.64 |
| para family protein | DXD04_00725 | Not Available | Positive | 188208 - 188963 | 28281.3 |
| duf3408 domain-containing protein | DXD04_00730 | Not Available | Positive | 188969 - 189418 | 17017.1 |
| duf3408 domain-containing protein | DXD04_00735 | Not Available | Positive | 189442 - 189804 | 13998.7 |
| conjugal transfer protein trad | DXD04_00740 | Not Available | Positive | 189801 - 190541 | 27973.8 |
| duf4134 domain-containing protein | DXD04_00745 | Not Available | Positive | 190743 - 191054 | 10655.1 |
| duf4133 domain-containing protein | DXD04_00750 | Not Available | Positive | 191065 - 191397 | 12566.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

