Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DXD04_07505 | Not Available | Positive | 1870091 - 1871407 | 49006.8 |
| glycosyltransferase family 2 protein | DXD04_07510 | Not Available | Positive | 1871404 - 1872426 | 39005.8 |
| septum formation protein maf | DXD04_07515 | Not Available | Negative | 1872423 - 1873019 | 22760.5 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | DXD04_07520 | Not Available | Negative | 1873029 - 1873547 | 19132.3 |
| duf2520 domain-containing protein | DXD04_07525 | Not Available | Negative | 1873566 - 1874363 | 30050.9 |
| hypothetical protein | DXD04_07530 | Not Available | Negative | 1874360 - 1874695 | 12371.8 |
| nad(p)h nitroreductase | DXD04_07535 | Not Available | Negative | 1874695 - 1875231 | 19994.9 |
| gnat family n-acetyltransferase | DXD04_07540 | Not Available | Positive | 1875307 - 1876275 | 37856.9 |
| methylmalonyl-coa epimerase | DXD04_07545 | Not Available | Positive | 1876441 - 1876845 | 14526.6 |
| acyl-coa carboxylase subunit beta | DXD04_07550 | Not Available | Positive | 1876895 - 1878448 | 56440.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

