Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DXD04_07405 | Not Available | Negative | 1847756 - 1848094 | 12936.4 |
| duf86 domain-containing protein | DXD04_07410 | Not Available | Negative | 1848447 - 1848854 | 15333.8 |
| nucleotidyltransferase | DXD04_07415 | Not Available | Negative | 1848838 - 1849131 | 11349.9 |
| atp-binding protein | DXD04_07420 | Not Available | Negative | 1849462 - 1850856 | 52559.8 |
| undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | DXD04_07425 | Not Available | Negative | 1851187 - 1852299 | 41458.6 |
| n-acetylmuramoyl-l-alanine amidase | DXD04_07430 | Not Available | Negative | 1852408 - 1852851 | 16555.9 |
| dna-binding protein | DXD04_07435 | Not Available | Negative | 1852952 - 1853386 | 15772.8 |
| duf4248 domain-containing protein | DXD04_07440 | Not Available | Negative | 1853735 - 1854004 | 10290.5 |
| virulence protein e | DXD04_07445 | Not Available | Negative | 1854162 - 1856255 | 79823.3 |
| polysaccharide export protein | DXD04_07450 | Not Available | Positive | 1857324 - 1858121 | 29683.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

