Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4369 domain-containing protein | DXD04_07255 | Not Available | Negative | 1816906 - 1817568 | 25326.5 |
| duf2007 domain-containing protein | DXD04_07260 | Not Available | Positive | 1817889 - 1818386 | 18652.5 |
| adp-ribosylglycohydrolase family protein | DXD04_07265 | Not Available | Positive | 1818473 - 1819267 | 29107.3 |
| hypothetical protein | DXD04_07270 | Not Available | Negative | 1819376 - 1819951 | 21966.9 |
| toll/interleukin-1 receptor domain-containing protein | DXD04_07275 | Not Available | Positive | 1820406 - 1821458 | 40534.4 |
| pyruvate, phosphate dikinase | DXD04_07280 | Not Available | Negative | 1821723 - 1824449 | 100666.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DXD04_07285 | Not Available | Positive | 1824662 - 1826080 | 53933.8 |
| rlua family pseudouridine synthase | DXD04_07290 | Not Available | Positive | 1826122 - 1827048 | 35931.6 |
| had family phosphatase | DXD04_07295 | Not Available | Positive | 1827058 - 1827684 | 23676.1 |
| hypothetical protein | DXD04_07300 | Not Available | Positive | 1827979 - 1828380 | 15898.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

