Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | DXD04_07205 | Not Available | Positive | 1801904 - 1803790 | 72755.1 |
| lipocalin | DXD04_07210 | Not Available | Negative | 1803885 - 1804397 | 19746.7 |
| tetratricopeptide repeat protein | DXD04_07215 | Not Available | Positive | 1804575 - 1807058 | 94741.9 |
| carboxypeptidase regulatory-like domain-containing protein | DXD04_07220 | Not Available | Negative | 1807062 - 1808156 | 42554.0 |
| hypothetical protein | DXD04_07225 | Not Available | Negative | 1808146 - 1809120 | 37158.6 |
| duf3857 domain-containing protein | DXD04_07230 | Not Available | Positive | 1809482 - 1811452 | 73904.0 |
| duf3857 domain-containing protein | DXD04_07235 | Not Available | Positive | 1811489 - 1813126 | 59863.5 |
| aaa family atpase | DXD04_07240 | Not Available | Positive | 1813311 - 1814867 | 59729.3 |
| duf4377 domain-containing protein | DXD04_07245 | Not Available | Negative | 1814876 - 1815757 | 33669.6 |
| duf4932 domain-containing protein | DXD04_07250 | Not Available | Negative | 1815759 - 1816862 | 43422.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

