Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 29 | DXD04_07145 | Not Available | Positive | 1788813 - 1790216 | 52774.5 |
| duf4976 domain-containing protein | DXD04_07150 | Not Available | Positive | 1790233 - 1791774 | 57532.0 |
| rna methyltransferase | DXD04_07155 | Not Available | Negative | 1791892 - 1792701 | 29437.8 |
| duf4890 domain-containing protein | DXD04_07160 | Not Available | Negative | 1792789 - 1793403 | 22782.8 |
| duf1847 domain-containing protein | DXD04_07165 | Not Available | Positive | 1793558 - 1794196 | 24040.8 |
| aaa family atpase | DXD04_07170 | Not Available | Negative | 1794279 - 1795826 | 59495.9 |
| flavin reductase family protein | DXD04_07180 | Not Available | Negative | 1797596 - 1798156 | 20314.3 |
| hypothetical protein | DXD04_07185 | Not Available | Negative | 1798196 - 1798720 | 19906.8 |
| tigr04076 family protein | DXD04_07195 | Not Available | Negative | 1800738 - 1801040 | 11532.9 |
| duf1810 family protein | DXD04_07200 | Not Available | Negative | 1801055 - 1801450 | 15143.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

