Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-iminoacetate synthase thih | DXD04_06890 | Not Available | Negative | 1728627 - 1729778 | 43747.3 |
| phosphomethylpyrimidine synthase thic | DXD04_06895 | Not Available | Negative | 1729830 - 1731530 | 63784.9 |
| thiazole synthase | DXD04_06900 | Not Available | Negative | 1731590 - 1732366 | 27700.6 |
| hypothetical protein | DXD04_06905 | Not Available | Positive | 1732391 - 1732651 | 9493.83 |
| thiamine phosphate synthase | DXD04_06910 | Not Available | Negative | 1732879 - 1733538 | 24296.4 |
| sulfur carrier protein this | DXD04_06915 | Not Available | Negative | 1733528 - 1733728 | 7076.67 |
| hypothetical protein | DXD04_06920 | Not Available | Negative | 1733965 - 1734636 | 26432.0 |
| metallophosphoesterase | DXD04_06925 | Not Available | Negative | 1734617 - 1735405 | 30240.4 |
| cupin domain-containing protein | DXD04_06930 | Not Available | Negative | 1735640 - 1736089 | 16268.3 |
| yitt family protein | DXD04_06935 | Not Available | Negative | 1736253 - 1737215 | 34846.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

