Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction endonuclease subunit r | DXD04_06685 | Not Available | Positive | 1683753 - 1685222 | 57585.8 |
| hypothetical protein | DXD04_06690 | Not Available | Positive | 1685227 - 1685565 | 12258.7 |
| helix-turn-helix domain-containing protein | DXD04_06695 | Not Available | Negative | 1685759 - 1686124 | 13553.4 |
| type ii toxin-antitoxin system higb family toxin | DXD04_06700 | Not Available | Negative | 1686162 - 1686458 | 11438.8 |
| atp-binding protein | DXD04_06705 | Not Available | Negative | 1686686 - 1690342 | 143839.0 |
| hypothetical protein | DXD04_06710 | Not Available | Negative | 1690326 - 1690916 | 23320.3 |
| hypothetical protein | DXD04_06715 | Not Available | Negative | 1690943 - 1692178 | 48749.2 |
| duf4080 domain-containing protein | DXD04_06720 | Not Available | Negative | 1692422 - 1694059 | 62445.3 |
| ribose-phosphate pyrophosphokinase | DXD04_06725 | Not Available | Negative | 1694190 - 1695128 | 34257.3 |
| thiamine phosphate synthase | DXD04_06730 | Not Available | Negative | 1695221 - 1695829 | 23051.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

