Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3127 domain-containing protein | DXD04_06635 | Not Available | Negative | 1678989 - 1679435 | 16478.4 |
| hypothetical protein | DXD04_06640 | Not Available | Negative | 1679436 - 1680341 | 34892.5 |
| hypothetical protein | DXD04_06645 | Not Available | Negative | 1680332 - 1680976 | 24309.3 |
| hypothetical protein | DXD04_06650 | Not Available | Negative | 1680925 - 1681131 | 7790.57 |
| hypothetical protein | DXD04_06655 | Not Available | Negative | 1681139 - 1681381 | 9468.59 |
| Trna-undet | Not Available | Not Available | Positive | 1681401 - 1681479 | Not Available |
| hypothetical protein | DXD04_06665 | Not Available | Negative | 1681537 - 1681725 | 7484.0 |
| hypothetical protein | DXD04_06670 | Not Available | Negative | 1682386 - 1682640 | 9873.39 |
| duf2693 domain-containing protein | DXD04_06675 | Not Available | Negative | 1682637 - 1682957 | 12429.4 |
| helix-turn-helix domain-containing protein | DXD04_06680 | Not Available | Positive | 1683093 - 1683749 | 25115.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

