Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DXD04_00590 | Not Available | Positive | 154176 - 155411 | 47891.2 |
| rhum protein | DXD04_00595 | Not Available | Positive | 155423 - 155785 | 13614.5 |
| dna-binding protein | DXD04_00600 | Not Available | Negative | 155863 - 156168 | 11724.1 |
| dna-binding protein | DXD04_00605 | Not Available | Negative | 156200 - 156499 | 11590.3 |
| hypothetical protein | DXD04_00610 | Not Available | Negative | 156505 - 156702 | 7273.61 |
| dna-binding protein | DXD04_00615 | Not Available | Positive | 156701 - 157063 | 14059.1 |
| dna-binding protein | DXD04_00620 | Not Available | Positive | 157067 - 157417 | 13925.0 |
| duf4099 domain-containing protein | DXD04_00625 | Not Available | Positive | 157438 - 159009 | 59804.1 |
| type ia dna topoisomerase | DXD04_00630 | Not Available | Positive | 159070 - 161157 | 77608.9 |
| duf1896 domain-containing protein | DXD04_00635 | Not Available | Positive | 161185 - 161772 | 22268.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

