Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_06475 | Not Available | Negative | 1659227 - 1659742 | 19540.2 |
| hypothetical protein | DXD04_06480 | Not Available | Negative | 1659743 - 1659925 | 7027.31 |
| hypothetical protein | DXD04_06485 | Not Available | Negative | 1660073 - 1660258 | 7140.46 |
| dna methylase | DXD04_06490 | Not Available | Negative | 1660335 - 1661075 | 28066.3 |
| phosphoadenosine phosphosulfate reductase | DXD04_06495 | Not Available | Negative | 1661078 - 1661749 | 26326.6 |
| asch domain-containing protein | DXD04_06500 | Not Available | Negative | 1661927 - 1662286 | 13954.7 |
| Trna-val | Not Available | Not Available | Positive | 1662308 - 1662383 | Not Available |
| duf3873 domain-containing protein | DXD04_06510 | Not Available | Negative | 1662452 - 1662664 | 8078.71 |
| hypothetical protein | DXD04_06515 | Not Available | Negative | 1662661 - 1663173 | 19703.2 |
| amidoligase enzyme | DXD04_06520 | Not Available | Negative | 1663170 - 1664036 | 32955.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

