Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 1631413 - 1631488 | Not Available |
| hypothetical protein | DXD04_06330 | Not Available | Positive | 1631630 - 1632865 | 47826.6 |
| hypothetical protein | DXD04_06335 | Not Available | Positive | 1632893 - 1633159 | 10636.0 |
| hypothetical protein | DXD04_06340 | Not Available | Negative | 1633368 - 1634447 | 42720.2 |
| hypothetical protein | DXD04_06345 | Not Available | Negative | 1634490 - 1634963 | 17618.2 |
| n-acetylmuramoyl-l-alanine amidase | DXD04_06350 | Not Available | Negative | 1634981 - 1635472 | 17912.5 |
| hypothetical protein | DXD04_06355 | Not Available | Negative | 1635785 - 1636210 | 15366.5 |
| hypothetical protein | DXD04_06360 | Not Available | Negative | 1636259 - 1638373 | 75204.4 |
| hypothetical protein | DXD04_06365 | Not Available | Negative | 1638386 - 1638871 | 18273.7 |
| hypothetical protein | DXD04_06370 | Not Available | Negative | 1638947 - 1639342 | 14657.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

