Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | DXD04_06175 | Not Available | Negative | 1582648 - 1584738 | 79146.2 |
| duf5020 family protein | DXD04_06180 | Not Available | Positive | 1584854 - 1585558 | 27454.4 |
| ncs2 family permease | DXD04_06185 | Not Available | Positive | 1585595 - 1586881 | 45752.8 |
| atp-binding cassette domain-containing protein | DXD04_06190 | Not Available | Positive | 1587200 - 1588117 | 34800.0 |
| abc transporter permease | DXD04_06195 | Not Available | Positive | 1588141 - 1589394 | 46206.5 |
| methylmalonyl-coa mutase | DXD04_06200 | Not Available | Negative | 1589467 - 1591620 | 79484.2 |
| methylmalonyl-coa mutase small subunit | DXD04_06205 | Not Available | Negative | 1591629 - 1593539 | 70372.1 |
| hypothetical protein | DXD04_06210 | Not Available | Positive | 1593560 - 1593814 | 9973.63 |
| putative transporter | DXD04_06215 | Not Available | Positive | 1593830 - 1595509 | 60642.5 |
| hypothetical protein | DXD04_06220 | Not Available | Negative | 1595793 - 1597421 | 60329.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

