Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase | DXD04_06025 | Not Available | Negative | 1535196 - 1537196 | 76689.7 |
| mate family efflux transporter | DXD04_06030 | Not Available | Positive | 1537769 - 1539136 | 49489.0 |
| crp/fnr family transcriptional regulator | DXD04_06035 | Not Available | Positive | 1539526 - 1540092 | 22590.2 |
| acyltransferase | DXD04_06040 | Not Available | Positive | 1540188 - 1541339 | 42929.5 |
| response regulator | DXD04_06045 | Not Available | Positive | 1541613 - 1545572 | 150762.0 |
| tonb-dependent receptor | DXD04_06050 | Not Available | Positive | 1545861 - 1549055 | 118754.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_06055 | Not Available | Positive | 1549069 - 1550682 | 61227.8 |
| hypothetical protein | DXD04_06060 | Not Available | Positive | 1550698 - 1551729 | 38605.1 |
| hypothetical protein | DXD04_06065 | Not Available | Positive | 1551816 - 1555244 | 130650.0 |
| beta-galactosidase | DXD04_06070 | Not Available | Positive | 1555282 - 1557867 | 97118.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

