Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | DXD04_05975 | Not Available | Negative | 1526139 - 1526996 | 31562.6 |
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | DXD04_05980 | Not Available | Negative | 1527017 - 1529047 | 75081.3 |
| ribosome silencing factor | DXD04_05985 | Not Available | Negative | 1529070 - 1529429 | 13602.3 |
| Trna-gln | Not Available | Not Available | Positive | 1529657 - 1529727 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 1529768 - 1529838 | Not Available |
| ompa family protein | DXD04_06000 | Not Available | Positive | 1530082 - 1531221 | 41476.2 |
| tigr01212 family radical sam protein | DXD04_06005 | Not Available | Positive | 1531388 - 1532332 | 36895.2 |
| fpra family a-type flavoprotein | DXD04_06010 | Not Available | Positive | 1532362 - 1533552 | 44841.1 |
| mechanosensitive ion channel family protein | DXD04_06015 | Not Available | Negative | 1533637 - 1534503 | 31722.9 |
| threonylcarbamoyl-amp synthase | DXD04_06020 | Not Available | Negative | 1534535 - 1535146 | 22920.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

