Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_05925 | Not Available | Positive | 1515085 - 1515462 | 14137.2 |
| hypothetical protein | DXD04_05930 | Not Available | Negative | 1515686 - 1516879 | 46373.8 |
| dna-binding protein | DXD04_05935 | Not Available | Negative | 1516873 - 1517145 | 10209.4 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DXD04_05940 | Not Available | Negative | 1517879 - 1520158 | 86520.2 |
| lysm peptidoglycan-binding domain-containing protein | DXD04_05945 | Not Available | Negative | 1520237 - 1521502 | 48004.8 |
| hypothetical protein | DXD04_05950 | Not Available | Negative | 1521506 - 1522237 | 28054.3 |
| parb/repb/spo0j family partition protein | DXD04_05955 | Not Available | Negative | 1522300 - 1523196 | 33402.3 |
| para family protein | DXD04_05960 | Not Available | Negative | 1523201 - 1523968 | 28056.2 |
| 5'/3'-nucleotidase sure | DXD04_05965 | Not Available | Positive | 1524183 - 1524956 | 28370.9 |
| lipid-a-disaccharide synthase | DXD04_05970 | Not Available | Positive | 1524953 - 1526104 | 43517.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

