Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic phosphate transporter | DXD04_05875 | Not Available | Positive | 1503592 - 1505886 | 85091.2 |
| carbonic anhydrase | DXD04_05880 | Not Available | Negative | 1505946 - 1506494 | 20581.9 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase | DXD04_05885 | Not Available | Positive | 1506652 - 1507830 | 44026.4 |
| Tmrna,resume consensus sequence (at 88): attatctggcaacgaaaa | Not Available | Not Available | Positive | 1507957 - 1508351 | Not Available |
| site-specific integrase | DXD04_05895 | Not Available | Positive | 1508605 - 1509804 | 45998.1 |
| hypothetical protein | DXD04_05900 | Not Available | Positive | 1510104 - 1510373 | 9910.96 |
| aaa family atpase | DXD04_05905 | Not Available | Positive | 1510463 - 1511347 | 33521.2 |
| duf3871 family protein | DXD04_05910 | Not Available | Positive | 1511313 - 1512374 | 40707.7 |
| wg repeat-containing protein | DXD04_05915 | Not Available | Positive | 1513717 - 1514523 | 30187.8 |
| hypothetical protein | DXD04_05920 | Not Available | Positive | 1514525 - 1514944 | 15440.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

