Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cardiolipin synthase | DXD04_05825 | Not Available | Positive | 1492506 - 1493795 | 49099.7 |
| dna polymerase iii subunit delta' | DXD04_05830 | Not Available | Positive | 1493899 - 1495029 | 43430.1 |
| hypothetical protein | DXD04_05835 | Not Available | Positive | 1495036 - 1496430 | 52094.7 |
| gliding motility lipoprotein gldh | DXD04_05840 | Not Available | Positive | 1496417 - 1496968 | 20829.7 |
| rod shape-determining protein roda | DXD04_05845 | Not Available | Negative | 1496903 - 1498360 | 54351.6 |
| penicillin-binding protein 2 | DXD04_05850 | Not Available | Negative | 1498341 - 1500191 | 69314.1 |
| rod shape-determining protein mred | DXD04_05855 | Not Available | Negative | 1500191 - 1500688 | 19111.9 |
| rod shape-determining protein mrec | DXD04_05860 | Not Available | Negative | 1500719 - 1501570 | 31658.7 |
| rod shape-determining protein | DXD04_05865 | Not Available | Negative | 1501659 - 1502681 | 36950.9 |
| imp cyclohydrolase | DXD04_05870 | Not Available | Negative | 1502754 - 1503347 | 21904.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

