Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_05625 | Not Available | Positive | 1453701 - 1454675 | 37177.2 |
| hypothetical protein | DXD04_05630 | Not Available | Positive | 1454731 - 1455450 | 28259.2 |
| hypothetical protein | DXD04_05635 | Not Available | Positive | 1455633 - 1455959 | 11711.8 |
| vire protein | DXD04_05640 | Not Available | Positive | 1455998 - 1458265 | 86096.9 |
| hypothetical protein | DXD04_05645 | Not Available | Positive | 1458282 - 1458698 | 15770.4 |
| arac family transcriptional regulator | DXD04_05650 | Not Available | Negative | 1458745 - 1459656 | 35008.0 |
| hypothetical protein | DXD04_05655 | Not Available | Positive | 1459827 - 1460042 | 8268.0 |
| aldo/keto reductase | DXD04_05660 | Not Available | Positive | 1460057 - 1461163 | 41601.8 |
| nadph-flavin oxidoreductase | DXD04_05665 | Not Available | Positive | 1461183 - 1462178 | 37095.9 |
| yjgp/yjgq family permease | DXD04_05670 | Not Available | Negative | 1462255 - 1463430 | 45548.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

