Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | DXD04_05575 | Not Available | Negative | 1436122 - 1437396 | 47576.6 |
| phosphoserine phosphatase serb | DXD04_05580 | Not Available | Negative | 1437417 - 1438649 | 45864.7 |
| molecular chaperone htpg | DXD04_05585 | Not Available | Negative | 1438775 - 1440832 | 78587.6 |
| atp-dependent clp protease atp-binding subunit | DXD04_05590 | Not Available | Negative | 1440952 - 1443489 | 95203.6 |
| dna gyrase subunit a | DXD04_05595 | Not Available | Positive | 1443735 - 1446281 | 95897.7 |
| hypothetical protein | DXD04_05600 | Not Available | Positive | 1446330 - 1447547 | 45331.7 |
| arac family transcriptional regulator | DXD04_05605 | Not Available | Positive | 1447780 - 1448607 | 32197.9 |
| alpha/beta hydrolase | DXD04_05610 | Not Available | Positive | 1448701 - 1449774 | 39718.2 |
| dna-binding protein | DXD04_05615 | Not Available | Negative | 1450009 - 1450443 | 16493.6 |
| n-6 dna methylase | DXD04_05620 | Not Available | Positive | 1451023 - 1453680 | 100373.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

