Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_05520 | Not Available | Positive | 1422315 - 1422563 | 8916.15 |
| hypothetical protein | DXD04_05525 | Not Available | Positive | 1422868 - 1423065 | 7151.09 |
| blai/meci/copy family transcriptional regulator | DXD04_05530 | Not Available | Positive | 1423256 - 1423630 | 14480.2 |
| tonb family protein | DXD04_05535 | Not Available | Positive | 1423644 - 1425569 | 72052.1 |
| rna polymerase sigma-70 factor | DXD04_05540 | Not Available | Positive | 1426076 - 1426633 | 21725.2 |
| fecr family protein | DXD04_05545 | Not Available | Positive | 1426689 - 1427690 | 39055.5 |
| susc/raga family tonb-linked outer membrane protein | DXD04_05550 | Not Available | Positive | 1428073 - 1431510 | 125236.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_05555 | Not Available | Positive | 1431534 - 1432904 | 51460.5 |
| glycerophosphodiester phosphodiesterase | DXD04_05560 | Not Available | Positive | 1432973 - 1433866 | 33837.2 |
| had family phosphatase | DXD04_05565 | Not Available | Positive | 1434023 - 1434646 | 24232.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

