Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i pullulanase | DXD04_05470 | Not Available | Positive | 1409670 - 1411670 | 74522.0 |
| atp-binding cassette domain-containing protein | DXD04_05475 | Not Available | Positive | 1411720 - 1413171 | 55005.6 |
| nitronate monooxygenase | DXD04_05480 | Not Available | Negative | 1413425 - 1414375 | 34333.4 |
| tetratricopeptide repeat protein | DXD04_05485 | Not Available | Negative | 1414385 - 1416088 | 63261.2 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | DXD04_05490 | Not Available | Negative | 1416118 - 1416867 | 27417.2 |
| dna repair protein recn | DXD04_05495 | Not Available | Negative | 1416886 - 1418553 | 62058.1 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | DXD04_05500 | Not Available | Negative | 1418560 - 1419765 | 43455.4 |
| 3'-5' exonuclease | DXD04_05505 | Not Available | Negative | 1419778 - 1420554 | 29378.8 |
| dna polymerase iii subunit beta | DXD04_05510 | Not Available | Negative | 1420579 - 1421703 | 41464.6 |
| duf3127 domain-containing protein | DXD04_05515 | Not Available | Positive | 1421880 - 1422251 | 14117.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

