Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_05420 | Not Available | Negative | 1401262 - 1402701 | 54424.0 |
| phosphate abc transporter substrate-binding protein | DXD04_05425 | Not Available | Negative | 1402721 - 1403662 | 34932.2 |
| energy transducer tonb | DXD04_05430 | Not Available | Negative | 1403677 - 1404495 | 30846.6 |
| biopolymer transporter exbd | DXD04_05435 | Not Available | Negative | 1404516 - 1405175 | 24881.8 |
| biopolymer transporter exbd | DXD04_05440 | Not Available | Negative | 1405187 - 1405792 | 22747.0 |
| mota/tolq/exbb proton channel family protein | DXD04_05445 | Not Available | Negative | 1405858 - 1406664 | 29050.5 |
| hypothetical protein | DXD04_05450 | Not Available | Negative | 1406804 - 1407226 | 16437.3 |
| na+/h+ antiporter nhac family protein | DXD04_05455 | Not Available | Positive | 1407424 - 1408728 | 46252.9 |
| duf4286 family protein | DXD04_05460 | Not Available | Positive | 1408786 - 1409091 | 12028.5 |
| crossover junction endodeoxyribonuclease ruvc | DXD04_05465 | Not Available | Positive | 1409088 - 1409657 | 20841.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

