Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucuronate isomerase | DXD04_05370 | Not Available | Negative | 1391168 - 1392574 | 54260.4 |
| tagaturonate reductase | DXD04_05375 | Not Available | Positive | 1392887 - 1394326 | 54013.5 |
| hypothetical protein | DXD04_05380 | Not Available | Positive | 1394462 - 1395250 | 30222.3 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | DXD04_05385 | Not Available | Negative | 1395232 - 1395624 | 14931.9 |
| prolipoprotein diacylglyceryl transferase | DXD04_05390 | Not Available | Negative | 1395617 - 1396444 | 31741.5 |
| long-chain fatty acid--coa ligase | DXD04_05395 | Not Available | Negative | 1396616 - 1398268 | 62520.9 |
| inorganic phosphate transporter | DXD04_05400 | Not Available | Negative | 1398416 - 1399423 | 35957.7 |
| duf47 family protein | DXD04_05405 | Not Available | Negative | 1399438 - 1400085 | 24895.7 |
| deda family protein | DXD04_05410 | Not Available | Negative | 1400082 - 1400726 | 24273.6 |
| hypothetical protein | DXD04_05415 | Not Available | Negative | 1400710 - 1401231 | 19527.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

