Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatine deiminase family protein | DXD04_05270 | Not Available | Negative | 1363531 - 1364568 | 39430.6 |
| translocation/assembly module tamb | DXD04_05275 | Not Available | Negative | 1364581 - 1369146 | 170881.0 |
| sodium:proton antiporter | DXD04_05280 | Not Available | Positive | 1369404 - 1370849 | 51063.9 |
| aminopeptidase | DXD04_05285 | Not Available | Positive | 1370879 - 1372273 | 52574.0 |
| susc/raga family tonb-linked outer membrane protein | DXD04_05290 | Not Available | Positive | 1372412 - 1375162 | 101582.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_05295 | Not Available | Positive | 1375173 - 1376804 | 62188.3 |
| na(+)-translocating nadh-quinone reductase subunit a | DXD04_05300 | Not Available | Positive | 1376977 - 1378329 | 49467.0 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit b | DXD04_05305 | Not Available | Positive | 1378355 - 1379530 | 42607.4 |
| na(+)-translocating nadh-quinone reductase subunit c | DXD04_05310 | Not Available | Positive | 1379545 - 1380225 | 24492.1 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | DXD04_05315 | Not Available | Positive | 1380240 - 1380878 | 22950.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

