Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_05215 | Not Available | Negative | 1353022 - 1353429 | 15280.3 |
| sel1 repeat family protein | DXD04_05220 | Not Available | Negative | 1353618 - 1355906 | 90060.1 |
| hypothetical protein | DXD04_05225 | Not Available | Negative | 1356008 - 1356898 | 34112.5 |
| dna-processing protein dpra | DXD04_05230 | Not Available | Positive | 1357054 - 1357899 | 30782.4 |
| hypothetical protein | DXD04_05235 | Not Available | Positive | 1357968 - 1358723 | 29461.2 |
| duf3990 domain-containing protein | DXD04_05245 | Not Available | Positive | 1359635 - 1360105 | 18279.0 |
| hypothetical protein | DXD04_05250 | Not Available | Positive | 1360102 - 1360323 | 8474.34 |
| trkh family potassium uptake protein | DXD04_05255 | Not Available | Positive | 1360342 - 1361847 | 55526.9 |
| hypothetical protein | DXD04_05260 | Not Available | Negative | 1361860 - 1362318 | 18447.0 |
| acyltransferase | DXD04_05265 | Not Available | Negative | 1362647 - 1363534 | 33264.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

