Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase | DXD04_05165 | Not Available | Positive | 1345525 - 1346736 | 47042.6 |
| dna primase | DXD04_05170 | Not Available | Positive | 1346969 - 1347907 | 36518.5 |
| plasmid mobilization relaxosome protein mobc | DXD04_05175 | Not Available | Positive | 1348053 - 1348406 | 13189.1 |
| mobilization protein | DXD04_05180 | Not Available | Positive | 1348387 - 1349328 | 35655.8 |
| hypothetical protein | DXD04_05185 | Not Available | Positive | 1349351 - 1349620 | 10651.7 |
| hypothetical protein | DXD04_05190 | Not Available | Positive | 1349671 - 1350045 | 14777.1 |
| hypothetical protein | DXD04_05195 | Not Available | Negative | 1350101 - 1350694 | 24459.3 |
| wyl domain-containing protein | DXD04_05200 | Not Available | Negative | 1350714 - 1351613 | 36116.3 |
| transposase | DXD04_05205 | Not Available | Negative | 1351636 - 1352079 | 17402.4 |
| hypothetical protein | DXD04_05210 | Not Available | Positive | 1352243 - 1353037 | 30695.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

