Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | DXD04_05110 | Not Available | Positive | 1329616 - 1330587 | 35765.8 |
| abc transporter atp-binding protein | DXD04_05115 | Not Available | Positive | 1330663 - 1332597 | 73769.7 |
| m13 family peptidase | DXD04_05120 | Not Available | Positive | 1332629 - 1334668 | 76090.9 |
| hypothetical protein | DXD04_05125 | Not Available | Positive | 1335049 - 1336419 | 51748.8 |
| atp-binding protein | DXD04_05135 | Not Available | Negative | 1338421 - 1340490 | 78809.8 |
| dna-binding response regulator | DXD04_05140 | Not Available | Negative | 1340487 - 1341125 | 24130.2 |
| site-specific integrase | DXD04_05145 | Not Available | Positive | 1341720 - 1342970 | 48118.8 |
| hypothetical protein | DXD04_05150 | Not Available | Positive | 1342981 - 1344537 | 60465.5 |
| hypothetical protein | DXD04_05155 | Not Available | Positive | 1344516 - 1344923 | 15838.4 |
| dna-binding protein | DXD04_05160 | Not Available | Positive | 1345169 - 1345519 | 13143.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

