Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DXD04_05060 | Not Available | Positive | 1310250 - 1311668 | 52620.2 |
| tonb-dependent receptor | DXD04_05065 | Not Available | Positive | 1312217 - 1315186 | 109085.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_05070 | Not Available | Positive | 1315211 - 1316833 | 59969.0 |
| hypothetical protein | DXD04_05075 | Not Available | Positive | 1316900 - 1317892 | 36336.1 |
| tonb-dependent receptor | DXD04_05080 | Not Available | Positive | 1318239 - 1321394 | 113983.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_05085 | Not Available | Positive | 1321422 - 1322810 | 52207.9 |
| gtpase hflx | DXD04_05090 | Not Available | Positive | 1322895 - 1324151 | 47660.4 |
| duf4954 family protein | DXD04_05095 | Not Available | Positive | 1324164 - 1326155 | 74583.5 |
| tlpa family protein disulfide reductase | DXD04_05100 | Not Available | Positive | 1326218 - 1327720 | 55876.1 |
| fumarate hydratase | DXD04_05105 | Not Available | Positive | 1327820 - 1329463 | 60539.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

