Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_00085 | DXD04_00435 | Not Available | Positive | 110572 - 111555 | Not Available |
| rna polymerase sigma-70 factor | DXD04_00440 | Not Available | Positive | 111657 - 112175 | 20585.7 |
| duf4974 domain-containing protein | DXD04_00445 | Not Available | Positive | 112250 - 113059 | 30436.2 |
| tonb-dependent receptor | DXD04_00450 | Not Available | Positive | 113056 - 115659 | 99467.5 |
| duf4249 domain-containing protein | DXD04_00455 | Not Available | Positive | 115666 - 116802 | 43654.8 |
| hypothetical protein | DXD04_00460 | Not Available | Positive | 116835 - 117461 | 24221.2 |
| duf2851 family protein | DXD04_00465 | Not Available | Negative | 117661 - 118932 | 48991.6 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DXD04_00470 | Not Available | Positive | 119016 - 119771 | 27319.6 |
| s26 family signal peptidase | DXD04_00475 | Not Available | Positive | 119774 - 121198 | 55121.4 |
| signal peptidase i | DXD04_00480 | Not Available | Positive | 121202 - 122119 | 34658.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

