Odoribacter splanchnicus strain AF16-14

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Odoribacteraceae

Genus

Odoribacter

Description

Odoribacter splanchnicus strain AF16-14 is a Gram-negative bacterium that is a component of healthy microbiota. This strain belongs to the genus Odoribacter, which is characterized by its role in the human microbiome. While specific metabolic or functional traits of strain AF16-14 are not provided, members of the Odoribacter genus are generally associated with the fermentation of carbohydrates and the production of short-chain fatty acids, which can have beneficial effects on gut health. The presence of Odoribacter splanchnicus within the healthy microbiota suggests that it may play a role in maintaining gut homeostasis and contributing to the overall balance of microbial communities. Additionally, as part of the diverse consortium of gut microbes, this strain may participate in competitive interactions with other microorganisms, potentially influencing microbial diversity and resilience in the intestinal tract. Understanding the specific contributions of Odoribacter splanchnicus strain AF16-14 to gut health may provide insights into its ecological role and its potential utility in probiotic applications or therapeutic interventions aimed at restoring microbial balance in dysbiotic conditions. Further research is warranted to elucidate the functional capabilities and interactions of this strain within the complex ecosystem of the human gut microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyOdoribacteraceae
GenusOdoribacter
SpeciesOdoribacter splanchnicus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathealthy microbiota
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Odoribacter splanchnicus strain AF16-14

Accession NumberQRYC00000000.1

Gene Summary

Adenine Count

1293129 bp

Thymine Count

1299686 bp

Guanine Count

1021539 bp

Cytosine Count

1004230 bp

Genome Length

4619031 bp

Protein-coding Genes

3779 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+217 - 327Not Available
hypothetical proteinDWW57_00005Not Available-164 - 4309977.23
ketoacyl-acp synthase iiiDWW57_00010Not Available-516 - 146034359.7
tetr/acrr family transcriptional regulatorDWW57_00015Not Available-1542 - 212923059.3
yitt family proteinDWW57_00020Not Available+2435 - 340636163.7
[fefe] hydrogenase h-cluster maturation gtpase hydfDWW57_00025Not Available-3375 - 457444637.3
sigma-54-dependent fis family transcriptional regulatorDWW57_00030Not Available-4584 - 573542997.2
patatinDWW57_00035Not Available+5859 - 805181921.6
fad:protein fmn transferaseDWW57_00040Not Available+8083 - 907837110.5
hypothetical proteinDWW57_00045Not Available+9098 - 1107777201.2

Displaying genes 1 – 10 of 3842 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

83 records
Metabolite IDMetabolite nameStructureCAS number
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da

Displaying 1–10 of 83 metabolites