Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Odoribacteraceae
Genus
Odoribacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Odoribacteraceae |
| Genus | Odoribacter |
| Species | Odoribacter splanchnicus |
| Strain | strain AF16-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | healthy microbiota |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1293129 bp
Thymine Count
1299686 bp
Guanine Count
1021539 bp
Cytosine Count
1004230 bp
Genome Length
4619031 bp
Protein-coding Genes
3779 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen polysaccharide polymerase wzy | DWW57_17665 | Not Available | Negative | 4247717 - 4249156 | 55630.5 |
| lipopolysaccharide biosynthesis protein | DWW57_17670 | Not Available | Negative | 4249149 - 4250684 | 58258.9 |
| pseudaminic acid synthase | DWW57_17675 | Not Available | Negative | 4250699 - 4251718 | 37831.2 |
| udp-2,4-diacetamido-2,4, 6-trideoxy-beta-l-altropyranose hydrolase | DWW57_17680 | Not Available | Negative | 4251708 - 4253147 | 55062.1 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DWW57_17685 | Not Available | Negative | 4253180 - 4254484 | 48466.2 |
| lps biosynthesis protein | DWW57_17690 | Not Available | Negative | 4254489 - 4255259 | 29011.9 |
| aldo/keto reductase | DWW57_17695 | Not Available | Negative | 4255256 - 4256092 | 31572.8 |
| udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminase | DWW57_17700 | Not Available | Negative | 4256138 - 4257301 | 44207.8 |
| udp-n-acetylglucosamine 4,6-dehydratase (inverting) | DWW57_17705 | Not Available | Negative | 4257298 - 4258320 | 38239.0 |
| arsr family transcriptional regulator | DWW57_17710 | Not Available | Negative | 4258517 - 4259068 | 20799.3 |
Pathways
415 pathways
Health Effects
No health effects information available for this bacterium.
