Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DW035_04825 | Not Available | Negative | 1159866 - 1160651 | 30451.9 |
| hypothetical protein | DW035_04830 | Not Available | Negative | 1160663 - 1161196 | 20189.7 |
| sigma-54-dependent fis family transcriptional regulator | DW035_04835 | Not Available | Negative | 1161183 - 1162502 | 48880.5 |
| carboxypeptidase-like regulatory domain-containing protein | DW035_04840 | Not Available | Negative | 1162576 - 1165230 | 101883.0 |
| inositol-3-phosphate synthase | DW035_04845 | Not Available | Negative | 1165426 - 1166733 | 48823.8 |
| ribokinase | DW035_04850 | Not Available | Positive | 1166997 - 1167902 | 33720.3 |
| phosphate abc transporter atp-binding protein | DW035_04855 | Not Available | Negative | 1167983 - 1168753 | 29136.7 |
| phosphate abc transporter permease psta | DW035_04860 | Not Available | Negative | 1168741 - 1169610 | 31289.0 |
| phosphate abc transporter permease subunit pstc | DW035_04865 | Not Available | Negative | 1169633 - 1170490 | 30553.3 |
| phosphate abc transporter substrate-binding protein psts | DW035_04870 | Not Available | Negative | 1170506 - 1171564 | 37744.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

