Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate starvation-inducible protein phoh | DW035_04775 | Not Available | Positive | 1150153 - 1151151 | 37149.8 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DW035_04780 | Not Available | Positive | 1151193 - 1152140 | 35940.9 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | DW035_04785 | Not Available | Positive | 1152219 - 1152959 | 27967.0 |
| shikimate dehydrogenase | DW035_04790 | Not Available | Positive | 1152978 - 1153721 | 27803.6 |
| alpha/beta hydrolase | DW035_04795 | Not Available | Positive | 1153735 - 1154688 | 36164.6 |
| nad(+) synthase | DW035_04800 | Not Available | Negative | 1154774 - 1156714 | 71691.4 |
| transcriptional repressor | DW035_04805 | Not Available | Positive | 1156914 - 1157336 | 16128.4 |
| nadh peroxidase | DW035_04810 | Not Available | Positive | 1157384 - 1157935 | 20795.7 |
| duf418 domain-containing protein | DW035_04815 | Not Available | Negative | 1158178 - 1159362 | 45472.5 |
| preprotein translocase subunit secg | DW035_04820 | Not Available | Negative | 1159485 - 1159859 | 12946.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

