Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeih family protein | DW035_04620 | Not Available | Positive | 1104412 - 1105488 | 38129.0 |
| arac family transcriptional regulator | DW035_04625 | Not Available | Negative | 1105550 - 1106398 | 32953.3 |
| duf308 domain-containing protein | DW035_04630 | Not Available | Negative | 1106395 - 1106964 | 20559.4 |
| cytochrome c biogenesis protein | DW035_04635 | Not Available | Negative | 1107054 - 1109147 | 80913.6 |
| hypothetical protein | DW035_04640 | Not Available | Negative | 1109153 - 1110310 | 43969.4 |
| hypothetical protein | DW035_04645 | Not Available | Negative | 1110330 - 1111055 | 26113.1 |
| porin | DW035_04650 | Not Available | Negative | 1111066 - 1112280 | 44722.4 |
| thiol oxidoreductase | DW035_04655 | Not Available | Negative | 1112307 - 1113731 | 53039.4 |
| peptidase m75 | DW035_04660 | Not Available | Negative | 1113830 - 1115014 | 43164.1 |
| hypothetical protein | DW035_04665 | Not Available | Negative | 1115039 - 1116403 | 50443.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

