Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_04265 | Not Available | Negative | 1024458 - 1026080 | 59425.5 |
| hypothetical protein | DW035_04270 | Not Available | Negative | 1026092 - 1026976 | 32812.8 |
| hypothetical protein | DW035_04275 | Not Available | Negative | 1026982 - 1027707 | 26449.6 |
| duf4493 domain-containing protein | DW035_04280 | Not Available | Negative | 1027729 - 1029921 | 79525.4 |
| duf4493 domain-containing protein | DW035_04285 | Not Available | Negative | 1029921 - 1031201 | 45339.2 |
| duf4493 domain-containing protein | DW035_04290 | Not Available | Negative | 1031216 - 1033705 | 90638.9 |
| hypothetical protein | DW035_04295 | Not Available | Positive | 1034080 - 1035201 | 41118.5 |
| port family protein | DW035_04300 | Not Available | Positive | 1035222 - 1036007 | 29154.0 |
| hypothetical protein | DW035_04305 | Not Available | Negative | 1036288 - 1037838 | 55388.9 |
| tonb-dependent receptor | DW035_04310 | Not Available | Positive | 1038234 - 1040693 | 92153.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

