Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DW035_04215 | Not Available | Negative | 1011917 - 1012684 | 27624.2 |
| tolc family protein | DW035_04220 | Not Available | Negative | 1012707 - 1014089 | 50199.5 |
| acrb/acrd/acrf family protein | DW035_04225 | Not Available | Negative | 1014098 - 1017331 | 117671.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW035_04230 | Not Available | Negative | 1017413 - 1018624 | 43440.9 |
| nadp-dependent malic enzyme | DW035_04235 | Not Available | Positive | 1018963 - 1021248 | 84273.4 |
| hypothetical protein | DW035_04240 | Not Available | Positive | 1021346 - 1021525 | 6506.48 |
| nadp-specific glutamate dehydrogenase | DW035_04245 | Not Available | Positive | 1021694 - 1023028 | 49190.0 |
| hypothetical protein | DW035_04250 | Not Available | Negative | 1023079 - 1023258 | 7066.56 |
| hypothetical protein | DW035_04255 | Not Available | Negative | 1023276 - 1023527 | 9313.0 |
| hypothetical protein | DW035_04260 | Not Available | Negative | 1023589 - 1024155 | 21764.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

