Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_04015 | Not Available | Negative | 964418 - 966466 | 79483.4 |
| alpha-l-fucosidase | DW035_04020 | Not Available | Negative | 966482 - 967831 | 51537.4 |
| Trna-ser | Not Available | Not Available | Positive | 968054 - 968140 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 968153 - 968225 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 968247 - 968333 | Not Available |
| formate c-acetyltransferase | DW035_04040 | Not Available | Positive | 968590 - 970812 | 83327.5 |
| pyruvate formate lyase-activating protein | DW035_04045 | Not Available | Positive | 970901 - 971629 | 27875.6 |
| hypothetical protein | DW035_04050 | Not Available | Positive | 971880 - 972107 | 8674.59 |
| hypothetical protein | DW035_04055 | Not Available | Negative | 972192 - 972779 | 21494.6 |
| lactate utilization protein | DW035_04060 | Not Available | Negative | 972787 - 974154 | 51307.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

