Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase der | DW035_03865 | Not Available | Negative | 930453 - 931766 | 49496.6 |
| gtpase era | DW035_03870 | Not Available | Negative | 931799 - 932680 | 33829.1 |
| ketoacyl-acp synthase iii | DW035_03875 | Not Available | Negative | 932757 - 933758 | 36726.1 |
| 50s ribosomal protein l32 | DW035_03880 | Not Available | Negative | 933866 - 934051 | 6852.33 |
| duf177 domain-containing protein | DW035_03885 | Not Available | Negative | 934068 - 934604 | 20480.2 |
| hypothetical protein | DW035_03890 | Not Available | Negative | 934721 - 934966 | 9569.94 |
| n-acetylglucosamine-6-phosphate deacetylase | DW035_03895 | Not Available | Positive | 934987 - 936153 | 42512.4 |
| n-acetylglucosamine-6-phosphate deacetylase | DW035_03900 | Not Available | Positive | 936175 - 937344 | 42257.8 |
| hypothetical protein | DW035_03905 | Not Available | Negative | 937600 - 937848 | 9636.61 |
| hypothetical protein | DW035_03910 | Not Available | Negative | 937988 - 938314 | 12703.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

