Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s20 | DW035_03815 | Not Available | Positive | 920942 - 921196 | 9651.98 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DW035_03820 | Not Available | Positive | 921361 - 923325 | 72819.4 |
| 4-alpha-glucanotransferase | DW035_03825 | Not Available | Positive | 923483 - 926161 | 104567.0 |
| thioredoxin | DW035_03830 | Not Available | Negative | 926228 - 926704 | 17272.1 |
| duf2795 domain-containing protein | DW035_03835 | Not Available | Negative | 926923 - 927144 | 8716.91 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DW035_03840 | Not Available | Negative | 927207 - 927776 | 21429.7 |
| hypothetical protein | DW035_03845 | Not Available | Negative | 927795 - 928193 | 15066.1 |
| ferritin | DW035_03850 | Not Available | Negative | 928632 - 929117 | 18393.6 |
| acyltransferase | DW035_03855 | Not Available | Negative | 929239 - 930174 | 35224.5 |
| Trna-leu | Not Available | Not Available | Positive | 930233 - 930316 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

