Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftsw/roda/spove family cell cycle protein | DW035_03765 | Not Available | Positive | 911187 - 912437 | 45680.8 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | DW035_03770 | Not Available | Positive | 912477 - 913607 | 41022.5 |
| udp-n-acetylmuramate--l-alanine ligase | DW035_03775 | Not Available | Positive | 913597 - 914973 | 51476.5 |
| cell division protein ftsq | DW035_03780 | Not Available | Positive | 914970 - 915707 | 28224.6 |
| cell division protein ftsa | DW035_03785 | Not Available | Positive | 915711 - 917288 | 59076.4 |
| cell division protein ftsz | DW035_03790 | Not Available | Positive | 917318 - 918628 | 47988.3 |
| gatb/yqey domain-containing protein | DW035_03795 | Not Available | Positive | 918668 - 919117 | 16192.8 |
| dna repair protein reco | DW035_03800 | Not Available | Negative | 919207 - 919932 | 28081.2 |
| hypothetical protein | DW035_03805 | Not Available | Negative | 919934 - 920449 | 18792.8 |
| Trna-glu | Not Available | Not Available | Positive | 920827 - 920898 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

