Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00159 family protein | DW035_03460 | Not Available | Positive | 837926 - 838705 | 29106.3 |
| gnat family n-acetyltransferase | DW035_03465 | Not Available | Negative | 838708 - 839733 | 39247.0 |
| duf2156 domain-containing protein | DW035_03470 | Not Available | Negative | 839730 - 840623 | 34295.9 |
| lrgb family protein | DW035_03475 | Not Available | Negative | 840719 - 841414 | 24403.0 |
| cida/lrga family protein | DW035_03480 | Not Available | Negative | 841395 - 841745 | 13068.8 |
| phosphate acetyltransferase | DW035_03485 | Not Available | Positive | 841981 - 842991 | 35449.4 |
| acetate kinase | DW035_03490 | Not Available | Positive | 843089 - 844288 | 43622.8 |
| sugar kinase | DW035_03495 | Not Available | Positive | 844442 - 845482 | 38510.8 |
| udp-2,3-diacylglucosamine diphosphatase | DW035_03500 | Not Available | Negative | 845567 - 846331 | 29840.9 |
| duf59 domain-containing protein | DW035_03505 | Not Available | Negative | 846351 - 846671 | 12044.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

